erikrikarddaniel pf-gtdb-analyses issues - Githubissues

erikrikarddaniel / pf-gtdb-analyses

Analysis tools for Pfitmap/RNRdb/GTDB

MIT License

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Fix proportions for "Other phyla" in RNR_overview.Rmd

#14 erikrikarddaniel closed 3 years ago
1
Check if NrdR tend to cooccur with RNRs without ATP cones

#13 erikrikarddaniel closed 3 years ago
1
Incorporate gff data so gene centric analyses can be done

#12 erikrikarddaniel opened 4 years ago
0
Genomes with no RNRs Vs. completeness

#11 GhadaNOUAIRIA closed 4 years ago
1
NrdR: New plot for NrdR with single and multiple RNRs per phylum

#10 erikrikarddaniel closed 4 years ago
1
NrdR analysis should be done on representative genomes only

#9 erikrikarddaniel closed 4 years ago
1
NrdR Anvi'o table (and more?) in separate script

#8 erikrikarddaniel opened 4 years ago
1
Let's keep Rmd files in the root directory

#7 erikrikarddaniel closed 4 years ago
2
Makefile with downloads and subsets in the wrong directory!

#6 erikrikarddaniel closed 4 years ago
6
Make targets for data subsetting scripts

#5 GhadaNOUAIRIA closed 4 years ago
7
Update Makefile

#4 GhadaNOUAIRIA closed 4 years ago
0
R script that subsets data to only RNR proteins

#3 erikrikarddaniel closed 4 years ago
5
Add files via upload

#2 GhadaNOUAIRIA closed 4 years ago
7
R script that subsets tables to only contain representative genomes

#1 erikrikarddaniel closed 4 years ago
5