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erikrikarddaniel / pfitmap

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Convert Taxon to multiple fields #51

Closed erikrikarddaniel closed 11 years ago

erikrikarddaniel commented 11 years ago

Replace the current hierarchical implementation with domain, kingdom, ..., species, strain.

binnisb commented 11 years ago

When getting the information from BioSQL:

  1. Domain should always be present
  2. If kingdom is missing, use the taxonomy level directly under domain
  3. If strain is missing, leave as NULL
  4. If any other taxonomy level is missing, insert "no class" or "no family" etc