remove outliers without filtering out

[akhst7]

I'd like to remove outliers from a box jitter plot. I tried outlier.color =NA, outlier.alpla=0, and outlier.fill=NA but none of these alone or in comb did not work. Is there a way to remove outliners from the box jitter plot without manipulating the original df in question ?

Thanks.

[erocoar]

Hi, thanks for pointing out this issue. Could you share some data to reproduce the problem? For me, setting outlier.color = NA seems to work, but it might also depend on the shape you're using

[akhst7]

Hi Frederick,

I tried with or without Jitter.shjape but I am still getting out line points.

If I do;

> ggplot(tmp, aes(x =Cluster, y = mean.scaled.GlcCer.total)) +
+ geom_boxjitter( jitter.color = NA, outlier.color = "black, errorbar.draw = TRUE, errorbar.length = 0.2, notch = T) 

I do see only outlier dots, but If I do the opposite;

> ggplot(tmp, aes(x =Cluster, y = mean.scaled.GlcCer.total)) +
+ geom_boxjitter( jitter.color = "black", outlier.color = NA, errorbar.draw = TRUE, errorbar.length = 0.2, notch = T) 

I still see the outliers.

Attached is the data file in question.

Thanks for helping.

On Mar 6, 2021, at 7:22 AM, Frederik Tiedemann notifications@github.com wrote:

Hi, thanks for pointing out this issue. Could you share some data to reproduce the problem? For me, setting outlier.color = NA seems to work, but it might also depend on the shape you're using

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