🐛 Bug: IndexError encountered 'ersilia -v api predict -i "eml_canonical.csv" -o "eos8d8a.csv" > my.log 2>&1'

[icey57]

Describe the bug.

When I tried to ran the model 'eos8d8a' to predict, the 'fetch', 'card', 'serve' commands ran correctly, but an error occurred at the API 'predict' command. Here is the error log file. my.log

Describe the steps to reproduce the behavior

No response

Expected behavior.

It should have created a new csv file named 'eos8d8a.csv', but in fact the terminal reminded an IndexError:list index out of range.

Screenshots.

Operating environment

Ubuntu-22.04.1

Additional context

No response

[GemmaTuron]

Hi @ICEY57

Quick question: did you specify python 3.7 when creating ersilia's conda environment? I see in your commands python 3.9

[UChisom]

Hi @GemmaTuron , I'm curious.

Is Ersilia only compatible with Python 3.7 for now?

Referring to the installation guide in the Gitbook, pre requisite 2: python and conda states that: We have tested our tools on Python 3.7 and above

I used version 3.7 though

[Femme-js]

@UChisom you can try recreating the conda environment with Python 3.7 version, if you hadn't done this before.

conda create -n ersilia python=3.7

[UChisom]

@Femme-js mine works fine, thanks.

I'm asking for curiousity :)

[icey57]

Problems solved. It seems that recreate the python 3.7 version environment helps. @GemmaTuron @Femme-js thanks for help

[icey57]

I guess maybe Ersilia only compatible with Python 3.7 for now @UChisom