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ersilia-os / ersilia

The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.
https://ersilia.io
GNU General Public License v3.0
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🐛 Bug: fetching eos6pbf model produce TypeError: expected str, bytes or os.PathLike object, not NoneType #362

Closed EstherIdabor closed 1 year ago

EstherIdabor commented 1 year ago

Describe the bug.

@GemmaTuron Trying to fetch eos6pbf model produced a typeError, because of failure to download all the packages needed to fetch the model due to a condaHTTPError. the log of the error is attached below eos6pbf.log

Describe the steps to reproduce the behavior

opened the ubuntu terminal conda activate ersilia ersilia fetch -v fetch eos6pbf > eos6pbf.log 2>&1

Expected behavior.

To successfully fetch the model with the ersilia -v fetch eos6pbf command

Screenshots.

attached is a screenshot and the error log

Screenshot (112) eos6pbf.log

Operating environment

windows 10 ubuntu18.04.5

Additional context

No response

GemmaTuron commented 1 year ago

Hello @EstherIdabor !

This is not due to ersilia but seems your internet connection fails during fetch: CondaHTTPError: HTTP 000 CONNECTION FAILED for url https://repo.anaconda.com/pkgs/main/linux-64/mkl-2021.4.0-h06a4308_640.conda Elapsed: -

An HTTP error occurred when trying to retrieve this URL. HTTP errors are often intermittent, and a simple retry will get you on your way.

You can try it again, and if it still gives the same error go on to use Google Colab which shouldn't show these errors ;)

EstherIdabor commented 1 year ago

After some reruns and ensuring I have a good internet connection, I got past this error

GemmaTuron commented 1 year ago

Thanks @EstherIdabor for the persistence!