ersilia-os / ersilia

The Ersilia Model Hub, a repository of AI/ML models for infectious and neglected disease research.
https://ersilia.io
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🐛 Bug: Error while fetching models (eos69p9,eos7pw8,eos3ae6) #420

Closed pravina5 closed 2 years ago

pravina5 commented 2 years ago

Describe the bug.

I was to fetch models after the installation of Ersilia. I got some errors related to grpcio build failing and No modules bentoml found.

Previously I had faced a problem with grpcio package so I downloaded it explicitly using : conda install grpcio

I have seen that bentoml also exists. Not sure why I am getting No module found. Attaching the log files for better understanding. The Errors are more or less the same in the logs for all the models that I have tried.

eos7pw8.log eos69p9.log eos3ae6.log

Describe the steps to reproduce the behavior

I ran these commands to fetch the model :

Expected behavior.

Successfully fetch model after running command .

Screenshots.

Screenshot 2022-10-24 at 12 01 50 AM Screenshot 2022-10-24 at 12 09 02 AM

Operating environment

System Version: macOS 12.1 (M1 chip) , Kernel-Version: Darwin 21.2.0

Additional context

I am using the following versions of the packages :

GemmaTuron commented 2 years ago

Hello @pravina5

Have you completed the necessary checks before? Running ersilia --help and testing the model eos3b5e

pravina5 commented 2 years ago

Hello Mentor Gemma

I had ran ersilia --help and ersilia catalog which worked for me . But for Model eos3b5e I got the same errors .

Screenshot 2022-10-24 at 3 51 15 PM
GemmaTuron commented 2 years ago

HEllo @pravina5 ,

I'd ask you to please look at your error files and check other issues that have already been solved, since many of your peers have been doing a lot of progress in the tasks assigned to them. As you can see if you try to understand the log files, you don't have git lfs installed. git: 'lfs' is not a git command. See 'git --help'.

Make sure you install it appropriately as explained in the requisites to run ersilia before attempting any more models

pravina5 commented 2 years ago

Thanks Mentor Gemma closing the issue .