Closed miquelduranfrigola closed 6 months ago
We have found many intron variants in PharmGKB and we consider that variant embeddings would not be very informative. Therefore, we decided to aim at predicting drug-gene pairs for now. I am closing this issue. We may want to reopen it in the future.
A drug-variant-gene triplet predictor needs to be developed. Unfortunately, the gene-drug pair pipeline can only be used partially, since in this case there are a few key differences, including:
Therefore, the tasks we need to address are the following: