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estebanpw / chromeister

A dotplot generator for large chromosomes
GNU General Public License v3.0
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compute_score.r error #14

Closed manishbiotechie closed 2 years ago

manishbiotechie commented 3 years ago

I installed the chromeister using conda.

I run the command CHROMEISTER -query GENOME1.fasta -db GENOME2.fasta -out dotplot.mat -dimension 2000 && Rscript compute_score.R dotplot.mat 2000 but at last I faced issue of Fatal error: cannot open file 'compute_score.R': No such file or directory

I will be thankful for help.

estebanpw commented 3 years ago

Hello @manishbiotechie

This error is known and has been fixed; however it is not yet available in bioconda. Please download it from this github and follow the instructions to compile it, or wait a few days and I will let you know when the bioconda repository is updated.

Sorry for the inconvenience!

estebanpw commented 3 years ago

Hello @manishbiotechie the update is already on bioconda now. Please try again and let me know if it is all working. Best regards, Esteban