Closed sjlow23 closed 8 months ago
Hey sorry Soo Jen, the pipeline on main
should not be used currently! It's under development, and probably won't work at all right now (ONT integration half-way done) - but thanks for this, correcting it now.
Thanks Eike. That was actually me submitting the bug. Let me know if you don't want these fixes.
We're going to run an older commit and stay out of your way :)
Soo Jen told me - sorry for the trouble! You can see there is a species identification and the ONT workflow for the Alfred in the works - it's a mess on main though, will revisit next week and bring this into a sharable format since Jean is also pushing on the wet-lab protocol and transfer :)
This should be
50
not50c
https://github.com/esteinig/cerebro/blob/8a66f362362f6877f60cd5c30dac82607f9cff0d/main.nf#L151causes this error: