I encounter an error when running nanoq on multiple fastq.gz files (from one barcode) with their generic Nanopore names, it usually tells me that file *_10.fastq.gz isn't valid in this context. When first concatinating the file this error is not raised.
error: Found argument 'barcode13/PAQ96126_pass_barcode13_a9873f14_18d6854d_10.fastq.gz' which wasn't expected, or isn't valid in this context
Hi,
I encounter an error when running nanoq on multiple fastq.gz files (from one barcode) with their generic Nanopore names, it usually tells me that file *_10.fastq.gz isn't valid in this context. When first concatinating the file this error is not raised.
error: Found argument 'barcode13/PAQ96126_pass_barcode13_a9873f14_18d6854d_10.fastq.gz' which wasn't expected, or isn't valid in this context
Is there a way to circumvent this?
Thanks in advance!