Unit tests core components

esteinig / vircov

Viral genome coverage evaluation for metagenomic diagnostics :drop_of_blood:

Apache License 2.0

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Open esteinig opened 2 years ago

esteinig commented 2 years ago

Implement appropriate unit tests for paf.rs and covplot.rs

Excluded for now:

CovPlot::to_console() - not sure how to implement tests for crossterm output to stdout
PafAlignment::to_console() - not sure how to test output tostdout
PafAlignment::coverage_plots() - same issue with crossterm unit testing

esteinig commented 2 years ago

Should probably format the strings for CovPlot and PafAlignment for testing, then output to console in a separate print function

esteinig commented 2 years ago

This can actually be done nicely in tests/app.rs binary testing