[ ] Reorganize the config directory : One for each tool used in the project, one for the setup scripts.
[ ] Initialize a conda environment : init_conda.sh -> Install dependencies and the different packages (mtcdb, tests, config)
[ ] Recover the root directory + Set the .env- Generate config files from templates. In particular, put the right python interpreter in codeworkspace and set the directories.
[ ] Which implementations of the setup ? I can put everything in a makefile.
Tasks