cnvkit.py antitarget my-targets.bed -g access-5k-mappable.hg19.bed
Detected file format: bed
Detected file format: bed
Traceback (most recent call last):
File "/home/khaled/miniconda3/bin/cnvkit.py", line 10, in
sys.exit(main())
File "/home/khaled/miniconda3/lib/python3.10/site-packages/cnvlib/cnvkit.py", line 10, in main
args.func(args)
File "/home/khaled/miniconda3/lib/python3.10/site-packages/cnvlib/commands.py", line 483, in _cmd_antitarget
base, ext = args.interval.rsplit(".", 1)
AttributeError: 'Namespace' object has no attribute 'interval'
cnvkit.py antitarget my-targets.bed -g access-5k-mappable.hg19.bed Detected file format: bed Detected file format: bed Traceback (most recent call last): File "/home/khaled/miniconda3/bin/cnvkit.py", line 10, in
sys.exit(main())
File "/home/khaled/miniconda3/lib/python3.10/site-packages/cnvlib/cnvkit.py", line 10, in main
args.func(args)
File "/home/khaled/miniconda3/lib/python3.10/site-packages/cnvlib/commands.py", line 483, in _cmd_antitarget
base, ext = args.interval.rsplit(".", 1)
AttributeError: 'Namespace' object has no attribute 'interval'