Can I use cnvkit software to evaluate the copy number of genes ？

etal / cnvkit

Copy number variant detection from targeted DNA sequencing

http://cnvkit.readthedocs.org

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Can I use cnvkit software to evaluate the copy number of genes ？ #849

Open zhoudreames opened 9 months ago

zhoudreames commented 9 months ago

For our no-human genome, the ADAM6 genes contain 4-6 copies， I want to estimate the copy number of ADAM6 at the population level by using WGS Illumina data. Can I use this software to do it？ thanks~