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eternagame
/
EternaBrain
Deep learning to solve RNA design puzzles
https://software.eternagame.org/
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Add pretrained models and full moveset files
#52
luxaritas
closed
5 months ago
0
Bump tensorflow from 1.15.5 to 2.11.1
#51
dependabot[bot]
opened
1 year ago
0
Bump tensorflow from 1.15.5 to 2.9.3
#50
dependabot[bot]
closed
1 year ago
1
Bump tensorflow from 1.15.5 to 2.7.2
#49
dependabot[bot]
closed
1 year ago
1
Bump tensorflow from 1.15.5 to 2.6.4
#48
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 1.15.5 to 2.5.3
#47
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 1.15.5 to 2.5.1
#46
dependabot[bot]
closed
2 years ago
1
Bump tensorflow from 1.15.5 to 2.4.0
#45
dependabot[bot]
closed
3 years ago
1
Bump tensorflow from 1.15.2 to 2.4.0
#44
dependabot[bot]
closed
3 years ago
0
Bump tensorflow from 1.15.2 to 2.3.1
#43
dependabot[bot]
closed
3 years ago
1
Bump tensorflow from 1.15.2 to 1.15.4
#42
dependabot[bot]
closed
3 years ago
1
Bump tensorflow from 1.14.0 to 1.15.2
#41
dependabot[bot]
closed
4 years ago
0
TensorFlow 2 Compatibility
#40
RK900
opened
4 years ago
0
Simplify "frontend" prediction code
#39
RK900
closed
5 years ago
0
Is the training / validation / test datasets publicly available?
#38
ostrokach
closed
4 years ago
1
Make EternaBrain Python3 compatible
#37
RK900
closed
5 years ago
0
Use BEAR notation
#36
RK900
opened
6 years ago
0
biorXiv paper comments
#35
dylanmmarshall
closed
5 years ago
2
Expedite EternaBrain benchmarking
#34
RK900
closed
6 years ago
2
More metrics for neural net
#33
RK900
closed
6 years ago
0
Not changing certain end pairs to G-C
#32
RK900
closed
6 years ago
0
Use Vienna 1.8.5 for folding
#31
RK900
closed
5 years ago
0
Add domain-specific fixes
#30
RK900
closed
6 years ago
3
Encode base sequence, locks, structures, pairmaps as one-hot
#29
RK900
closed
6 years ago
0
Add multi-GPU support for CNN
#28
RK900
opened
7 years ago
0
Fix base mutations
#27
RK900
closed
7 years ago
0
Make structure_and energy function work with multiple puzzles
#26
RK900
opened
7 years ago
0
Run TensorFlow models on multiple GPUs
#25
RK900
closed
7 years ago
0
Add SmartPredictor
#24
RK900
closed
7 years ago
4
Get data by puzzle ID and by player experience
#23
RK900
closed
7 years ago
0
Encode locked bases
#22
RK900
closed
7 years ago
0
Keras model has NaNs in losses
#21
RK900
closed
7 years ago
1
Add oligo information to training data
#20
RK900
closed
5 years ago
0
Encode location
#19
RK900
closed
7 years ago
0
Add target energy to features
#18
RK900
closed
7 years ago
1
Neural Net Predictions
#17
RK900
closed
7 years ago
1
TensorFlow accuracy
#16
RK900
closed
6 years ago
4
TensorBoard Scalars not loading
#15
RK900
closed
7 years ago
0
X and y not of same length
#14
RK900
closed
6 years ago
8
Current structure and energy lists not of same length as base sequence
#13
RK900
closed
7 years ago
0
Base sequences at current time
#12
RK900
closed
7 years ago
0
Get current structure and free energy from Eterna/Vienna API
#11
RK900
closed
7 years ago
1
Update encode_movesets_style
#10
RK900
closed
7 years ago
3
Incorrect shape size for NN input data
#9
RK900
closed
7 years ago
2
Use pickle to save GMM instead of running each time
#8
RK900
closed
7 years ago
0
Malformed String
#7
RK900
opened
7 years ago
0
Memory Error
#6
RK900
opened
7 years ago
0
PCA before or after Clustering
#5
RK900
closed
7 years ago
1
Encoded sequences not of same length
#4
RK900
closed
7 years ago
0
Data too High Dimension for clustering
#3
RK900
closed
7 years ago
3
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