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etetoolkit / ete

Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
http://etetoolkit.org
GNU General Public License v3.0
768 stars 216 forks source link

Ete4 gtdb #720

Closed dengzq1234 closed 8 months ago

dengzq1234 commented 8 months ago

as GTDB datbase create the release of latest version(https://data.gtdb.ecogenomic.org/releases/latest/), which allows us to defaulty update to the latest without specifically choosing the release version, the GTDBTaxa() module also adopt this feature. And still maintain the option of updating cusomize different releases dump file

dengzq1234 commented 8 months ago

Thanks @jordibc, please check the latest commit edf73cd

jordibc commented 8 months ago

Merged. Thanks @dengzq1234 !