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euroargodev / OSnet-GulfStream

A model to predict T/S profiles in the Gulf Stream region from surface data
GNU General Public License v3.0
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pip prod(deps): update netcdf4 requirement from <1.5.9,>=1.3.1 to >=1.3.1,<1.6.2 #36

Closed dependabot[bot] closed 1 year ago

dependabot[bot] commented 2 years ago

Updates the requirements on netcdf4 to permit the latest version.

Changelog

Sourced from netcdf4's changelog.

version 1.6.1 (tag v1.6.1rel)

  • add Dataset methods has__filter (where =zstd,blosc,bzip2,szip) to check for availability of extra compression filters.
  • release GIL for all C-lib calls (issue #1180).
  • Add support for nc_set_alignment and nc_get_alignment to control alignment of data within HDF5 files.

version 1.6.0 (tag v1.6.0rel)

  • add support for new quantization functionality in netcdf-c 4.9.0 via "signficant_digits" and "quantize_mode" kwargs in Dataset.createVariable. Default quantization_mode is "BitGroom", but alternate methods "BitRound" and GranularBitRound" also supported.
  • opening a Dataset in append mode (mode = 'a' or 'r+') creates a Dataset if one does not already exist (similar to python open builtin). Issue #1144. Added a mode='x' option (as in python open) which is the same as mode='w' with clobber=False.
  • allow createVariable to accept either Dimension instances or Dimension names in "dimensions" tuple kwarg (issue #1145).
  • remove all vestiges of python 2 in _netCDF4.pyx and set cython language_level directive to 3 in setup.py.
  • add 'compression' kwarg to createVariable to enable new compression functionality in netcdf-c 4.9.0. 'None','zlib','szip','zstd','bzip2' 'blosc_lz','blosc_lz4','blosc_lz4hc','blosc_zlib' and 'blosc_zstd' are currently supported. 'blosc_shuffle', 'szip_mask' and 'szip_pixels_per_block' kwargs also added. compression='zlib' is equivalent to (the now deprecated) zlib=True. If the environment variable NETCDF_PLUGIN_DIR is set to point to the directory with the compression plugin lib__nc* files, then the compression plugins will be installed within the package and be automatically available (the binary wheels have this). Otherwise, the environment variable HDF5_PLUGIN_PATH needs to be set at runtime to point to plugins in order to use the new compression options.
  • MFDataset did not aggregate 'name' variable attribute (issue #1153).
  • issue warning instead of raising an exception if missing_value or _FillValue can't be cast to the variable type when creating a masked array (issue #1152).
  • Define MPI_Session for compatibility with current mpi4py (PR #1156).

version 1.5.8 (tag v1.5.8rel)

  • Fix Enum bug (issue #1128): the enum_dict member of an EnumType read from a file contains invalid values when the enum is large enough (more than 127 or 255 members).
  • Binary wheels for aarch64 and python 3.10.

version 1.5.7 (tag v1.5.7rel)

  • don't try to mask vlens with default _FillValue, since vlens don't have a default _FillValue. This gets rid of numpy DeprecationWarning (issue #1099).

... (truncated)

Commits
  • 54ca2a0 add set_alignment/get_alignment to all, update docs
  • bb78ce6 update version in docstring
  • adc840f prepare for v1.6.1 release
  • 9ddebc9 Merge pull request #1187 from ocefpaf/check_win_failure
  • 136dc63 Update .github/workflows/miniconda.yml
  • 2ccba6f Update .github/workflows/miniconda.yml
  • 065ba17 Merge pull request #1183 from hmaarrfk/add_set_alignment
  • ea5dfbc test previous release of zlib
  • 3a81994 Add support for nc_set_alignment and nc_get_alignment
  • 5d35046 Merge pull request #1181 from Unidata/nogil
  • Additional commits viewable in compare view


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dependabot[bot] commented 1 year ago

Superseded by #48.