R package using the Forward-Backward algorithm to infer genotypes, recombination hotspots, and gene conversion tracts from low-coverage next-generation sequence data.
There appears to be an error in this function. When I simulated data with it then estimate its parameters I find that the estimated values are 2-3 times smaller than expected. When I do this same procedure with the tetrad simulation method I get back estimates close to the simulated parameters.
There appears to be an error in this function. When I simulated data with it then estimate its parameters I find that the estimated values are 2-3 times smaller than expected. When I do this same procedure with the tetrad simulation method I get back estimates close to the simulated parameters.