R package using the Forward-Backward algorithm to infer genotypes, recombination hotspots, and gene conversion tracts from low-coverage next-generation sequence data.
The R variants of the haploid and diploid FB algorithms are currently outdated compared to the C++ sources. Since the C++ code was verified back when the R versions were current and the C++ is about 100 times quicker I think we might as well remove the R variants altogether. They'll be removed in a future commit.
The R variants of the haploid and diploid FB algorithms are currently outdated compared to the C++ sources. Since the C++ code was verified back when the R versions were current and the C++ is about 100 times quicker I think we might as well remove the R variants altogether. They'll be removed in a future commit.