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everhartlab / sclerotinia-366

Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"
https://doi.org/10.7717/peerj.4152
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Investigate differentiation between white mold nursery populations #3

Closed zkamvar closed 7 years ago

zkamvar commented 7 years ago

The white mold nursery populations are unique because they are not fungicide treated and have the same cultivars planted in them year after year.

The question becomes, are white mold nurseries differentiated from each other or are they more or less homogeneous? We could use AMOVA to test for these with location and binary source (wmn or non-wmn) as the hierarchy.