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evoldoers / biomake

GNU-Make-like utility for managing builds and complex workflows
BSD 3-Clause "New" or "Revised" License
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Problem with swi-prolog 8? #73

Closed samwalrus closed 4 years ago

samwalrus commented 5 years ago

When I try and run biomake in Swi-prolog 8.1.12 it does not work I only get some stuff from Swi-Prolog:

` root@787e0d9980b6:/home# biomake hello.head swipl: Usage: 1) swipl [options] prolog-file ... [-- arg ...] 2) swipl [options] [-o executable] -c prolog-file ... 3) swipl --help Display this message (also -h) 4) swipl --version Display version information 4) swipl --arch Display architecture 6) swipl --dump-runtime-variables[=format] Dump link info in sh(1) format

Options: -x state Start from state (must be first) -g goal Run goal (may be repeated) -t toplevel Toplevel goal -f file User initialisation file -F file Site initialisation file -l file Script source file -s file Script source file -p alias=path Define file search path 'alias' -O Optimised compilation --tty[=bool] (Dis)allow tty control --signals[=bool] Do (not) modify signal handling --threads[=bool] Do (not) allow for threads --debug[=bool] Do (not) generate debug info --quiet[=bool] (-q) Do (not) suppress informational messages --traditional Disable extensions of version 7 --home=DIR Use DIR as SWI-Prolog home --stack_limit=size[BKMG] Specify maximum size of Prolog stacks --table_space=size[BKMG] Specify maximum size of SLG tables --shared_table_space=size[BKMG] Maximum size of shared SLG tables --pce[=bool] Make the xpce gui available --pldoc[=port] Start PlDoc server [at port]

Boolean options may be written as --name=bool, --name, --no-name or --noname`

This is using the SWI-Prolog docker container latest version. If I load a container for swipl:7.7.25 then biomake works fine.

cmungall commented 5 years ago

This seems familiar, I'll take a look later today

On Wed, Nov 6, 2019, 05:50 Sam Neaves notifications@github.com wrote:

When I try and run biomake in Swi-prolog 8.1.12 it does not work I only get some stuff from Swi-Prolog:

` root@787e0d9980b6:/home# biomake hello.head swipl: Usage: 1) swipl [options] prolog-file ... [-- arg ...] 2) swipl [options] [-o executable] -c prolog-file ... 3) swipl --help Display this message (also -h) 4) swipl --version Display version information 4) swipl --arch Display architecture 6) swipl --dump-runtime-variables[=format] Dump link info in sh(1) format

Options: -x state Start from state (must be first) -g goal Run goal (may be repeated) -t toplevel Toplevel goal -f file User initialisation file -F file Site initialisation file -l file Script source file -s file Script source file -p alias=path Define file search path 'alias' -O Optimised compilation --tty[=bool] (Dis)allow tty control --signals[=bool] Do (not) modify signal handling --threads[=bool] Do (not) allow for threads --debug[=bool] Do (not) generate debug info --quiet[=bool] (-q) Do (not) suppress informational messages --traditional Disable extensions of version 7 --home=DIR Use DIR as SWI-Prolog home --stack_limit=size[BKMG] Specify maximum size of Prolog stacks --table_space=size[BKMG] Specify maximum size of SLG tables --shared_table_space=size[BKMG] Maximum size of shared SLG tables --pce[=bool] Make the xpce gui available --pldoc[=port] Start PlDoc server [at port]

Boolean options may be written as --name=bool, --name, --no-name or --noname`

This is using the SWI-Prolog docker container latest version. If I load a container for swipl:7.7.25 then biomake works fine.

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samwalrus commented 4 years ago

In https://github.com/evoldoers/biomake/blob/master/bin/biomake There is a line $PATH_TO_ME/swipl_wrap -L0 -G0 -T0 -q -p library=$BIOMAKE_PATH -g 'assert(biomake_prog("'$0'")),main,halt' -t halt -s $BIOMAKE_PATH/biomake/cli -- "$@" © 2019 GitHub, Inc.

What are the -L0 -G0 and -T0? If I take those out it seems to work but I am not sure what they are intending to do..

cmungall commented 4 years ago

prior to SWI v8 these set limits on stack/heap. 0 meant no limit. This is all handled automatically in v8. So yes removing is good. We may want to retain a script "biomake-swipl7" but I think the canonical one should be v8

On Fri, Nov 8, 2019 at 4:05 PM Sam Neaves notifications@github.com wrote:

In https://github.com/evoldoers/biomake/blob/master/bin/biomake There is a line $PATH_TO_ME/swipl_wrap -L0 -G0 -T0 -q -p library=$BIOMAKE_PATH -g 'assert(biomake_prog("'$0'")),main,halt' -t halt -s $BIOMAKE_PATH/biomake/cli -- "$@" © 2019 GitHub, Inc.

What are the -L0 -G0 and -T0? If I take those out it seems to work but I am not sure what they are intending to do..

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