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evoldoers / machineboss

Bioinformatics Open Source Sequence machine
BSD 3-Clause "New" or "Revised" License
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Linear-space Forward implementation #111

Closed ihh closed 4 years ago

ihh commented 4 years ago

By adapting underlying DP_matrix class to use a rolling buffer. These would not allow traceback, but could be used for memory-efficient --loglike option.