evotools / hapbin

Efficient program for calculating Extended Haplotype Homozygosity (EHH) and Integrated Haplotype Score (iHS)
GNU General Public License v3.0
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WARNING: Map file has more loci than hap file! #67

Open meimingWu opened 2 years ago

meimingWu commented 2 years ago

Hello, after I run the command, there is an error, may I ask what is the reason? I hope to get your reply, thank you very much!

hapbin/build1/ihsbin
--hap data/sheep-ovis/orientalis/ihs/script/1.impute.hap --map data/sheep-ovis/orientalis/ihs/script/1.map --out 1

WARNING: Map file has more loci than hap file!

prenderj commented 1 year ago

How many lines are there in each of your files?

On Mon, 9 May 2022 at 14:22, meimingWu @.***> wrote:

Hello, after I run the command, there is an error, may I ask what is the reason? I hope to get your reply, thank you very much!

hapbin/build1/ihsbin --hap data/sheep-ovis/orientalis/ihs/script/1.impute.hap --map data/sheep-ovis/orientalis/ihs/script/1.map --out 1

WARNING: Map file has more loci than hap file!

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