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evsatt / Final_GOOS_BioEco

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Reading the data into sf #1

Open btupper opened 1 year ago

btupper commented 1 year ago

Hello @evsatt ,

I am looking at this paper in which the Data Availability section indicates that the code is found in the repository.

I am having difficulty reading into R the data provided in the Supplementary Materials. I have tried reading as a data frame and then converting to sf and I have tried using geojsonsf. Perhaps I am missing the obvious?

Any assistance would be so appreciated!

Thanks, Ben

evsatt commented 1 year ago

Hey Ben, Thanks for reaching out and happy to try and help! I read the csv files as read_csv and then converted them to geojson format. I am happy to also hop on a call or directly share information as needed. Best, Erin

On Wed, Nov 16, 2022 at 9:10 AM Ben Tupper @.***> wrote:

Hello @evsatt https://urldefense.com/v3/__https://github.com/evsatt__;!!Mih3wA!BLuRvnxlTqwR2CFoJEKfC4g0DGBKnPjwYM0f2LQJqfjeHEPNSN6GKVnqlYbUuZ0wbEZyUIM9Aa1rfghLB9jf5TNlDaMkGQ$ ,

I am looking at this paper https://urldefense.com/v3/__https://www.frontiersin.org/articles/10.3389/fmars.2021.737416/full__;!!Mih3wA!BLuRvnxlTqwR2CFoJEKfC4g0DGBKnPjwYM0f2LQJqfjeHEPNSN6GKVnqlYbUuZ0wbEZyUIM9Aa1rfghLB9jf5TPc4MlpDw$ in which the Data Availability section indicates that the code is found in the repository.

I am having difficulty reading into R the data provided in the Supplementary Materials. I have tried reading as a data frame and then converting to sf and I have tried using geojsonsf. Perhaps I am missing the obvious?

Any assistance would be so appreciated!

Thanks, Ben

— Reply to this email directly, view it on GitHub https://urldefense.com/v3/__https://github.com/evsatt/Final_GOOS_BioEco/issues/1__;!!Mih3wA!BLuRvnxlTqwR2CFoJEKfC4g0DGBKnPjwYM0f2LQJqfjeHEPNSN6GKVnqlYbUuZ0wbEZyUIM9Aa1rfghLB9jf5TMXRclHYA$, or unsubscribe https://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/AD356WOIFG6YDC57KS5MMX3WIUIP5ANCNFSM6AAAAAASCOZUB4__;!!Mih3wA!BLuRvnxlTqwR2CFoJEKfC4g0DGBKnPjwYM0f2LQJqfjeHEPNSN6GKVnqlYbUuZ0wbEZyUIM9Aa1rfghLB9jf5TMsSzWfXQ$ . You are receiving this because you were mentioned.Message ID: @.***>

-- 


Erin Satterthwaite | she/her
Marine Ecologist & Sustainability Researcher
CalCOFI Program Coordinator
UC San Diego - Scripps Institution of Oceanography
California Sea Grant & CalCOFI
9500 Gilman Dr., La Jolla, CA 92093-0232
*cell*: 805-895-4353

*Play is the highest form of research *
                                 *   ~Albert Einstein*
btupper commented 1 year ago

Great - thank you.

Perhaps a quick call or zoom would get me straightened out. I can do that when it suits you (including nowish).

evsatt commented 1 year ago

Great! I have a call shortly but could do at ~12:30pm would that work?

On Wed, Nov 16, 2022 at 10:22 AM Ben Tupper @.***> wrote:

Great - thank you.

Perhaps a quick call or zoom would get me straightened out. I can do that when it suits you (including nowish).

— Reply to this email directly, view it on GitHub https://urldefense.com/v3/__https://github.com/evsatt/Final_GOOS_BioEco/issues/1*issuecomment-1317468541__;Iw!!Mih3wA!DtWeZ696dNK3gyy7dXoEoIam2kr2NLDgzn8tHkxpDKhAkLF7qPfDyZLU9wioBuR8SHZ_EBbaU238kBmUnfBUsIyf0wnfzw$, or unsubscribe https://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/AD356WKTYH5SOMMTVIXAZHDWIUQ6VANCNFSM6AAAAAASCOZUB4__;!!Mih3wA!DtWeZ696dNK3gyy7dXoEoIam2kr2NLDgzn8tHkxpDKhAkLF7qPfDyZLU9wioBuR8SHZ_EBbaU238kBmUnfBUsIwXcz2i9Q$ . You are receiving this because you were mentioned.Message ID: @.***>

-- 


Erin Satterthwaite | she/her
Marine Ecologist & Sustainability Researcher
CalCOFI Program Coordinator
UC San Diego - Scripps Institution of Oceanography
California Sea Grant & CalCOFI
9500 Gilman Dr., La Jolla, CA 92093-0232
*cell*: 805-895-4353

*Play is the highest form of research *
                                 *   ~Albert Einstein*
btupper commented 1 year ago

Yes - I assume you're in California so that's 3:30 eastern. Works for me. Shoot me an email at @.*** when things gel for you. I can host a zoom thing easily. Thank you!

On Wed, Nov 16, 2022 at 1:26 PM Erin Satterthwaite @.***> wrote:

Great! I have a call shortly but could do at ~12:30pm would that work?

On Wed, Nov 16, 2022 at 10:22 AM Ben Tupper @.***> wrote:

Great - thank you.

Perhaps a quick call or zoom would get me straightened out. I can do that when it suits you (including nowish).

— Reply to this email directly, view it on GitHub < https://urldefense.com/v3/__https://github.com/evsatt/Final_GOOS_BioEco/issues/1*issuecomment-1317468541__;Iw!!Mih3wA!DtWeZ696dNK3gyy7dXoEoIam2kr2NLDgzn8tHkxpDKhAkLF7qPfDyZLU9wioBuR8SHZ_EBbaU238kBmUnfBUsIyf0wnfzw$ , or unsubscribe < https://urldefense.com/v3/__https://github.com/notifications/unsubscribe-auth/AD356WKTYH5SOMMTVIXAZHDWIUQ6VANCNFSM6AAAAAASCOZUB4__;!!Mih3wA!DtWeZ696dNK3gyy7dXoEoIam2kr2NLDgzn8tHkxpDKhAkLF7qPfDyZLU9wioBuR8SHZ_EBbaU238kBmUnfBUsIwXcz2i9Q$

. You are receiving this because you were mentioned.Message ID: @.***>

--


Erin Satterthwaite | she/her
Marine Ecologist & Sustainability Researcher
CalCOFI Program Coordinator
UC San Diego - Scripps Institution of Oceanography
California Sea Grant & CalCOFI
9500 Gilman Dr., La Jolla, CA 92093-0232
*cell*: 805-895-4353

*Play is the highest form of research *
* ~Albert Einstein*

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evsatt commented 1 year ago

Looks like GitHub blocks your email address. Mine is here: https://scripps.ucsd.edu/profiles/esatterthwaite

On Wed, Nov 16, 2022 at 10:29 AM Ben Tupper @.***> wrote:

Yes - I assume you're in California so that's 3:30 eastern. Works for me. Shoot me an email at @.*** when things gel for you. I can host a zoom thing easily. Thank you!

On Wed, Nov 16, 2022 at 1:26 PM Erin Satterthwaite @.***> wrote:

Great! I have a call shortly but could do at ~12:30pm would that work?

On Wed, Nov 16, 2022 at 10:22 AM Ben Tupper @.***> wrote:

Great - thank you.

Perhaps a quick call or zoom would get me straightened out. I can do that when it suits you (including nowish).

— Reply to this email directly, view it on GitHub <

https://urldefense.com/v3/__https://github.com/evsatt/Final_GOOS_BioEco/issues/1*issuecomment-1317468541__;Iw!!Mih3wA!DtWeZ696dNK3gyy7dXoEoIam2kr2NLDgzn8tHkxpDKhAkLF7qPfDyZLU9wioBuR8SHZ_EBbaU238kBmUnfBUsIyf0wnfzw$

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. You are receiving this because you were mentioned.Message ID: @.***>

--


Erin Satterthwaite | she/her
Marine Ecologist & Sustainability Researcher
CalCOFI Program Coordinator
UC San Diego - Scripps Institution of Oceanography
California Sea Grant & CalCOFI
9500 Gilman Dr., La Jolla, CA 92093-0232
*cell*: 805-895-4353

*Play is the highest form of research *
* ~Albert Einstein*

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-- 


Erin Satterthwaite | she/her
Marine Ecologist & Sustainability Researcher
CalCOFI Program Coordinator
UC San Diego - Scripps Institution of Oceanography
California Sea Grant & CalCOFI
9500 Gilman Dr., La Jolla, CA 92093-0232
*cell*: 805-895-4353

*Play is the highest form of research *
                                 *   ~Albert Einstein*