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eweitz / ideogram

Chromosome visualization for the web
https://eweitz.github.io/ideogram
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Fix comparative annotations for C. elegans #179

Closed eweitz closed 5 years ago

eweitz commented 5 years ago

This fixes a bug in which genomic plotting for multi-gene comparisons against C. elegans erroneously bunched annotations towards the start of the chromosome. It particularly affected orthology analysis involving gene lists for nematode.

More generally, this issue affected all comparative annotations for chromosome-level assemblies that lack cytobands and used relative chromosome scaling.

Now it is fixed, and has a test to prevent regressions.

coveralls commented 5 years ago

Coverage Status

Coverage increased (+0.3%) to 90.919% when pulling fdb7ecbe89e7b18e61a3ea41fb53ea15f6bc8aa3 on fix-worm-comparative-genomics into a727d438ff08a001e734d9bca1605897d99c6788 on master.