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eweitz / ideogram

Chromosome visualization for the web
https://eweitz.github.io/ideogram
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Search genes and paralogs #202

Closed eweitz closed 4 years ago

eweitz commented 4 years ago

This shows how to search genes and paralogs, and plot those in Ideogram for genome exploration.

Users can select an organism, search a gene symbol, then see the location of that gene and evolutionarily similar genes in the same organism, i.e. paralogs. The new "Paralogs" example UI also experiments with short vertical ideograms, which can be relevant if embedding Ideogram as a supplementary inset in another application's search user interface.

paralogs_ACE2_macaque_ideogram
coveralls commented 4 years ago

Coverage Status

Coverage decreased (-12.5%) to 78.227% when pulling af75339b8eb5936c883ab5b4fb1ea5c74d8b3b2e on search-genes-and-paralogs into a80e601a9900b2ef95fd08d02c53f58ecd24b223 on master.