Update samtools_sort_index for new sort command syntax.

ewels / clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.

https://ewels.github.io/clusterflow/

GNU General Public License v3.0

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Closed ewels closed 5 years ago

ewels commented 5 years ago

Updates the samtools sort command. See #122 for context.

ewels commented 5 years ago

Tested by Lindokuhle 👍