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ewels / clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
https://ewels.github.io/clusterflow/
GNU General Public License v3.0
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cf --qdel throws errors #19

Closed ewels closed 9 years ago

ewels commented 9 years ago

Deleting pipelines sometimes throws errors:

Deleting jobs from Pipeline id trim_galore_1415031486

Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
Use of uninitialized value $pipelinekey in string eq at /bi/apps/clusterflow/0.4_devel/source/CF/Headnodehelpers.pm line 574.
3 jobs deleted:
fkrueger has deleted job 228541
fkrueger has deleted job 228542
fkrueger has deleted job 228543
ewels commented 9 years ago

Ok @FelixKrueger, that should do the trick..