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ewels / clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
https://ewels.github.io/clusterflow/
GNU General Public License v3.0
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Run file filename option #22

Closed ewels closed 9 years ago

ewels commented 9 years ago

Add command line option to use a custom run file filename. The current run file filenames are called input_pipeline.run (where input is the first input file filename and pipeline is the pipeline being run). This is a problem if the same file is being used multiple times, as the runfile will be overwritten.

Enabling a custom filename means that clusterflow can be run many times in parallel.

ewels commented 9 years ago

Currently untested, but should work.