Closed ewels closed 9 years ago
These changes broke cf --qstat
- if there are multiple pipelines running, the headers are shown all together in a group at the top. Needs fixing.
Worse than just this - I think that some jobs now aren't being shown, if they're running at the same hierarchy level? eg. fastqc
and trim_galore
..and non Cluster Flow jobs now aren't shown. This is all kinds of broken.
Reverted above changes in fe5727e08789ead6417b29bb3b3ba3e1d740ec55
Will come back and try again later..
This is surprisingly difficult to do given the way that these parsing functions recursively iterate through the jobs hash. As this isn't a very common problem, I'm going to abandon this for now.
For a bonus, I did to some tidying and add a new feature (summary counts): 84d8a77fbbf5699f1fd0cd27c5ab356e894fb97b
Instead of
--qstat
showing hundreds ofdownload
jobs all waiting for dependencies, just count these and show a summary.