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ewels / clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.
https://ewels.github.io/clusterflow/
GNU General Public License v3.0
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Special value for @environment_module_alias to allow 'no module' #67

Closed ewels closed 9 years ago

ewels commented 9 years ago

Sometimes, certain environment modules don't exist and we just have to make sure that these programs are available in the PATH via different methods.

Add a special case value for the @environment_module_alias config option (null?) to allow the skipping of that module.

ewels commented 9 years ago

Implement for modules/deeptools_bamFingerprint.cfmod.pl and modules/deeptools_bamCoverage.cfmod.pl in #66