Closed sukanyaX closed 2 years ago
That method has long been deprecated. Depending on the version of PyMC3 that you're using, you can use init="adapt_full"
instead of step=
, or the sample
function from https://github.com/exoplanet-dev/pymc3-ext (without the step
argument... everything else should work)
Hope this helps!
In trying to run The Joker, I encountered this error, specifically in this code snippet when I try to make the corner plot -
trace = pm.sample( tune=500, draws=1000, start=mcmc_init, step=xo.get_dense_nuts_step(target_accept=0.95), random_seed=seed, cores=1, chains=2)
Thanks for your help!