I'm trying to use the new span visualizer to display some custom, nested spans predicted by spancat.
This is my code:
MODEL_PATH = # ...
DEFAULT_TEXT = """Cetuximab ist ein monoklonaler Antikörper, der gegen den epidermalen Wachstumsfaktorrezeptor (EGFR) gerichtet ist und \
dient zur Therapie des fortgeschrittenen kolorektalen Karzinoms zusammen mit Irinotecan oder in Kombination mit FOLFOX bzw. \
allein nach Versagen einer Behandlung mit Oxaliplatin und Irinotecan."""
st.set_page_config(layout="wide")
text = st.text_area("Text to analyze", DEFAULT_TEXT)
doc = process_text(MODEL_PATH, text)
visualize_spans(doc, spans_key="snomed", displacy_options=
{"colors": {
"Clinical_Drug": "#99FF99", "External_Substance" : "#CCFFCC", "Nutrient_or_Body_Substance" : "#E5FFCC",
"Therapeutic" : "#66B2FF", "Diagnostic" : "#CCE5FF",
"Other_Finding" : "#FFE5CC", "Diagnosis_or_Pathology" : "#FFCCCC"}} )
The nested spans are all shown on the same line, which makes it very hard to read.
I learned from the feature on LinkedIn, where a video was shown with nested spans nicely displayed.
How can I achieve this behavior? Do I need to pass some other options?
Dear all,
I'm trying to use the new span visualizer to display some custom, nested spans predicted by spancat. This is my code:
The nested spans are all shown on the same line, which makes it very hard to read. I learned from the feature on LinkedIn, where a video was shown with nested spans nicely displayed.
How can I achieve this behavior? Do I need to pass some other options?