With a quite high frequency for longer sequences RaSE reports the error below. For this sequence RNAplFold dotplot reports many probable basepairs.
Error in: TTAAAGGAGAAGCCTTCAAACTCCCATAGAGCTAGATGGCTATAACTCATCTCCTCTACTCACCCTTTACTACTACCCCATTTGACCTTTTTGTAGATAACTTAGGGTTTCCATAGATATCTTTTATTAGCTCCAATGCTCCAGGTGCTTTTGTAAGTTATAATTAATTTACTCATATAGGATCCCAAAGGAAATCGCATCGCACAATGGCAGAGTTTCC
Reverting to path graph from sequence
Hi @fabriziocosta
With a quite high frequency for longer sequences RaSE reports the error below. For this sequence RNAplFold dotplot reports many probable basepairs.