Closed PollyStar closed 2 years ago
Hi @PollyStar, thanks for raising this issue. Could you share your sessionInfo() as well so we can take a look?
In the meantime, could you run without parallelization by setting parallel = FALSE
and check to see if that works (albeit, more slowly)?
Thanks!
Hey, cheers, thanks. The parallel=F works!
Session info:
R version 4.1.2 (2021-11-01) Platform: x86_64-w64-mingw32/x64 (64-bit) Running under: Windows 10 x64 (build 18363)
Matrix products: default
locale:
[1] LC_COLLATE=English_United Kingdom.1252 LC_CTYPE=English_United Kingdom.1252
[3] LC_MONETARY=English_United Kingdom.1252 LC_NUMERIC=C
[5] LC_TIME=English_United Kingdom.1252
attached base packages: [1] parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] Hmisc_4.6-0 ggplot2_3.3.5 Formula_1.2-4 survival_3.2-13 lattice_0.20-45
[6] forecast_8.16 nlme_3.1-155 olsrr_0.5.3 corrr_0.4.3 car_3.0-12
[11] carData_3.0-5 writexl_1.4.0 xlsx_0.6.5 readxl_1.3.1 tidyr_1.1.4
[16] MarketMatching_1.2.0 dplyr_1.0.7 gsynth_1.2.1 augsynth_0.2.0 doParallel_1.0.16
[21] iterators_1.0.13 foreach_1.5.1 GeoLift_2.2.2
loaded via a namespace (and not attached):
[1] backports_1.4.1 plyr_1.8.6 splines_4.1.2 listenv_0.8.0 usethis_2.1.5
[6] CausalImpact_1.2.7 digest_0.6.29 htmltools_0.5.2 fansi_0.5.0 astsa_1.14
[11] magrittr_2.0.1 checkmate_2.0.0 memoise_2.0.1 cluster_2.1.2 remotes_2.4.2
[16] globals_0.14.0 xts_0.12.1 sandwich_3.0-1 tseries_0.10-49 prettyunits_1.1.1
[21] jpeg_0.1-9 colorspace_2.0-2 ggrepel_0.9.1 xfun_0.29 callr_3.7.0
[26] crayon_1.4.2 zoo_1.8-9 glue_1.6.0 gtable_0.3.0 pkgbuild_1.3.1
[31] quantmod_0.4.18 abind_1.4-5 scales_1.1.1 mvtnorm_1.1-3 rngtools_1.5.2
[36] Rcpp_1.0.8 lfe_2.8-7.1 dtw_1.22-3 xtable_1.8-4 progress_1.2.2
[41] htmlTable_2.4.0 foreign_0.8-81 proxy_0.4-26 htmlwidgets_1.5.4 RColorBrewer_1.1-2
[46] ellipsis_0.3.2 BoomSpikeSlab_1.2.4 pkgconfig_2.0.3 rJava_1.0-6 farver_2.1.0
[51] nnet_7.3-16 utf8_1.2.2 tidyselect_1.1.1 labeling_0.4.2 rlang_0.4.12
[56] reshape2_1.4.4 munsell_0.5.0 cellranger_1.1.0 tools_4.1.2 cachem_1.0.6
[61] osqp_0.6.0.5 cli_3.1.0 generics_0.1.2 devtools_2.4.3 stringr_1.4.0
[66] fastmap_1.1.0 goftest_1.2-3 knitr_1.37 processx_3.5.2 fs_1.5.2
[71] purrr_0.3.4 future_1.23.0 doRNG_1.8.2 brio_1.1.3 compiler_4.1.2
[76] rstudioapi_0.13 curl_4.3.2 png_0.1-7 testthat_3.1.2 tibble_3.1.6
[81] stringi_1.7.6 ps_1.6.0 desc_1.4.0 Matrix_1.3-4 LowRankQP_1.0.4
[86] urca_1.3-0 vctrs_0.3.8 pillar_1.7.0 lifecycle_1.0.1 lmtest_0.9-39
[91] data.table_1.14.2 bsts_0.9.7 R6_2.5.1 latticeExtra_0.6-29 directlabels_2021.1.13
[96] panelView_1.1.5 gridExtra_2.3 parallelly_1.30.0 sessioninfo_1.2.2 Boom_0.9.7
[101] codetools_0.2-18 MASS_7.3-54 assertthat_0.2.1 pkgload_1.2.4 xlsxjars_0.6.1
[106] rprojroot_2.0.2 withr_2.4.3 nortest_1.0-4 fracdiff_1.5-1 hms_1.1.1
[111] quadprog_1.5-8 grid_4.1.2 rpart_4.1-15 timeDate_3043.102 TTR_0.24.3
[116] base64enc_0.1-3
Hi @NicolasMatrices-v2, I've met the same issue when I ran the GeoLiftMarketSelection()
function in the demo. I've looked into it and below is my finding,
build_cluster()
by calling registerDoParallel()
.foreach()
in MarketMatching::best_matches()
. stopImplicitCluster()
in MarketMatching::best_matches()
shut down the workers.run_simulations()
directly uses foreach()
to conduct the parallel computing. stopCulster()
.When I tried to register the parallel backend in the 4th step, the code works on my computer. I assume it's the problem that we didn't register the parallel backend that caused the issue.
I'm not familiar with parallel computing in r. Therefore, if there are any errors in my guess, please correct me.
Hey all, @PollyStar, @yulisong !
Thanks Yuli for taking a look under the hood, your contributions are always appreciated :)
We have changed the parallelization to FALSE for the MarketMatching process. We've checked it on a Windows machine and the parallelization works. Could you reinstall set parallel = TRUE
and let us know if it works ? Thank you.
Hey all, @PollyStar, @yulisong !
Thanks Yuli for taking a look under the hood, your contributions are always appreciated :)
We have changed the parallelization to FALSE for the MarketMatching process. We've checked it on a Windows machine and the parallelization works. Could you reinstall set
parallel = TRUE
and let us know if it works ? Thank you.
Hi @NicolasMatrices-v2, it works now. Thank you for your quick update!
Hi, I've been trying to run the Geo Lift example code, but having issues (parallel computing) with the following:
resultsSearch <- GeoLiftPower.search(data = GeoTestData_PreTest, treatment_periods = c(15), N = c(2,3,4), horizon = 50, Y_id = "Y", location_id = "location", time_id = "time", top_results = 20, alpha = 0.1, type = "pValue", fixed_effects = TRUE, ProgressBar = TRUE)
Results in the following error: Setting up cluster. Importing functions into cluster. Deterministic setup with 2 locations in treatment. Error in summary.connection(connection) : invalid connection
I have tried it on a number of different machines but getting same error. Any ideas / solutions?