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facebookresearch / Kats

Kats, a kit to analyze time series data, a lightweight, easy-to-use, generalizable, and extendable framework to perform time series analysis, from understanding the key statistics and characteristics, detecting change points and anomalies, to forecasting future trends.
MIT License
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Kats installation throws gcc error #277

Open psxpa3 opened 2 years ago

psxpa3 commented 2 years ago

Hello,

I am trying to install Kats on Linux server, and while installing KATS getting error w.r.t fbprophet. The dependency tree that I could understood is KATs-> fbprophet -> Pystan -> gcc.

The default versions of that is being installed by KATS is 2.19.0.1 which is the reason that fbprophet is not being installed, and erroring out with this trace

""" Requirement already satisfied: zipp>=3.1.0 in /usr/local/lib/python3.6/site-packages (from importlib-resources->tqdm>=4.36.1->kats) (3.6.0) Requirement already satisfied: MarkupSafe>=2.0 in /usr/local/lib64/python3.6/site-packages (from jinja2->ax-platform->kats) (2.0.1) Using legacy 'setup.py install' for kats, since package 'wheel' is not installed. Using legacy 'setup.py install' for fbprophet, since package 'wheel' is not installed. Using legacy 'setup.py install' for gpytorch, since package 'wheel' is not installed. Using legacy 'setup.py install' for pymeeus, since package 'wheel' is not installed. Installing collected packages: pymeeus, tenacity, pillow, korean-lunar-calendar, kiwisolver, hijri-converter, gpytorch, ephem, cycler, convertdate, setuptools-git, pystan, plotly, matplotlib, LunarCalendar, llvmlite, jinja2, holidays, cmdstanpy, botorch, seaborn, pymannkendall, numba, fbprophet, ax-platform, kats Running setup.py install for pymeeus ... done Running setup.py install for gpytorch ... done Running setup.py install for fbprophet ... error ERROR: Command errored out with exit status 1: command: /usr/bin/python3.6 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-qwp7ohe8/fbprophet_448e98b19ac4433082176167ec40db97/setup.py'"'"'; file='"'"'/tmp/pip-install-qwp7ohe8/fbprophet_448e98b19ac4433082176167ec40db97/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-j3352f7m/install-record.txt --single-version-externally-managed --compile --install-headers /usr/local/include/python3.6m/fbprophet cwd: /tmp/pip-install-qwp7ohe8/fbprophet_448e98b19ac4433082176167ec40db97/ Complete output (11 lines): running install /usr/local/lib/python3.6/site-packages/setuptools/command/install.py:37: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. setuptools.SetuptoolsDeprecationWarning, running build running build_py creating build creating build/lib creating build/lib/fbprophet creating build/lib/fbprophet/stan_model INFO:pystan:COMPILING THE C++ CODE FOR MODEL anon_model_dfdaf2b8ece8a02eb11f050ec701c0ec NOW. error: command 'gcc' failed with exit status 1

ERROR: Command errored out with exit status 1: /usr/bin/python3.6 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-qwp7ohe8/fbprophet_448e98b19ac4433082176167ec40db97/setup.py'"'"'; file='"'"'/tmp/pip-install-qwp7ohe8/fbprophet_448e98b19ac4433082176167ec40db97/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-j3352f7m/install-record.txt --single-version-externally-managed --compile --install-headers /usr/local/include/python3.6m/fbprophet Check the logs for full command output.

"""

However, when I manually installed Pystan with this version 2.18.0.0, and then fbprophet 0.6 version could be installed manually. However, I do not know how while installing just kats other dependency specific versions can be specified. Could you please help me with the same. I have been trying it a lot, but have not gotten any progress.

Thank you very much for your help.

Splifit commented 1 year ago

I am not sure about my fix, but : it seems like you are using python 3.6. Try using conda to create a virtual environment with python 3.7/3.8/3.9 and install kats in this environment. It worked for me with python 3.9 virtual env.

Asha-Choudhary commented 1 year ago

One thing I realised installation of kats in Windows is not possible. Therefore u need to create a virtual environment to resolve this thing. If u are installing kats with 'pip install kats', it was giving me error despite of successful installation. So I uninstalled it and later re-installed it directly from the source using the following command

'pip install kats -i https://mirrors.aliyun.com/pypi/simple/' .

May be this helps!