Updates the contact prediction notebook to be compatible with colab and to compute contact precision
Data is downloaded from github + pdb
Model weights are downloaded using aria2c
This is ugly, but the code seems to hang when downloading on colab using torch hub... curl works without a separate install, but it takes ~5-10 minutes to download the weights. aria is several times faster.
Code for computing precisions and creating contact map visualizations is added
Updates the contact prediction notebook to be compatible with colab and to compute contact precision
curl
works without a separate install, but it takes ~5-10 minutes to download the weights. aria is several times faster.