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Evolutionary Scale Modeling (esm): Pretrained language models for proteins
MIT License
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MSA file #43

Closed ryan-224 closed 3 years ago

ryan-224 commented 3 years ago

Hi again.

Thank you for adding the MSA-1 model.

I am experimenting if we can get a better representation of proteins for some down-stream tasks with the MSA model.

Do you have any suggestions on how to prepare a proper MSA file (a3m) of a specific protein that fits the model? Like what tools you used, the procedures...

Thanks.

tomsercu commented 3 years ago

Hi Ryan, I'd suggest you join the discussion in #42, let me provide some pointers there.