facebookresearch / esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins
MIT License
3.26k stars 643 forks source link

Could you share the datasets used for testing zero-shot prediction ability of inverse folding model? #513

Open LTEnjoy opened 1 year ago

LTEnjoy commented 1 year ago

Hi!

I am writing to extend my gratitude for your exceptional work on "Learning inverse folding from millions of predicted structures." I am particularly impressed with the results of your research.

As part of my research, I am interested in reproducing your experiments by employing the provided inverse folding model. However, I am facing difficulty in processing the zero-shot datasets, such as in stability prediction on de novo small proteins.

I would greatly appreciate it if you could kindly provide the processed datasets that can approximately reproduce the results reported in your paper.

Thank you in advance for your assistance. I am eagerly looking forward to your response.