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factsmission / synospecies

Using Plazi Data to find currently accepted scientific names
https://synospecies.plazi.org/
MIT License
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add visualization for treatment links #83

Open myrmoteras opened 2 years ago

myrmoteras commented 2 years ago

Scholia:

A possibility to visualize the treatment treatment citation network is provided by Scholia.

toolforge

a life example is here

retog commented 2 years ago

I don't fully understand scholia. A graph view like the co-author network could be implemented for synonyms. In the current RDF there are no direct links between treatments. Due to the lack of a URI or other unique identifier for the item in the collection, we also can't easily recognize when to treatments refer to the same specimen.

myrmoteras commented 2 years ago

there are no direct links between treatments

can you be a bit more explicit in this? I thought treatment citation cite another treatment? This seems to be a very direct link? But I seem to misunderstand the very basics?!

retog commented 2 years ago

there are no direct links between treatments

can you be a bit more explicit in this? I thought treatment citation cite another treatment? This seems to be a very direct link? But I seem to misunderstand the very basics?!

These are the properties of a treatment:

image

None of the values is a treatment.

To check if any treatment has a property pointing to another treatment, we can run the following SPARQL-Query:

PREFIX treat: <http://plazi.org/vocab/treatment#>
ASK {
  ?s ?p ?o.
  ?s a treat:Treatment.
  ?o a treat:Treatment.
}

How do these "treatment citations" look like in the XML? I can then check how they are represented in RDF.