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faircloth-lab / phyluce

software for UCE (and general) phylogenomics
http://phyluce.readthedocs.org/
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phyluce_assembly_get_match_counts #174

Closed lixiaoyi-12 closed 3 years ago

lixiaoyi-12 commented 4 years ago

I'm a new learning of phyluce, and when I run the phyluce_assembly_get_match_counts script, there's an error shows TypeError: object of type 'NoneType' has no len() I'm quite confused of the problem. Is it because there's something wrong with my configuration file? Cause I just type the taxa's name and the name of their fasta file in it. Hope to receive a suggestion.

lixiaoyi-12 commented 4 years ago

The whole description of the bug is: Traceback (most recent call last): File "/usr/local/Anaconda2_5.3/bin/phyluce_assembly_get_match_counts", line 351, in main() File "/usr/local/Anaconda2_5.3/bin/phyluce_assembly_get_match_counts", line 329, in main len(organisms), TypeError: object of type 'NoneType' has no len()