faircloth-lab / phyluce

software for UCE (and general) phylogenomics
http://phyluce.readthedocs.org/
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phyluce_assembly_match_contigs_to_barcodes, OSError: lastz: b'Can\'t understand "/Users/rodolfoprobst/Library/CloudStorage/Box-Box/Myrmelachista_all"\n(my guess) perhaps you have too many sequence files in the command\n #335

Open probstrodolfo opened 2 months ago

probstrodolfo commented 2 months ago

Dear Brant,

I have been using your pipeline to extract CO1 barcodes for all my datasets, but for some reason I ran into this error today.

OSError: lastz: b'Can\'t understand "/Users/rodolfoprobst/Library/CloudStorage/Box-Box/Myrmelachista_all"\n(my guess) perhaps you have too many sequence files in the command\n

I tried all ways of troubleshooting that I could think of - including reinstalling LASTZ, double-checking repositories and files, tried using a single contig file with a single barcode bait, to no success. Any feedback you could provide on this error message?

Thank you! Rodolfo