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Added 'Clinical' entity
#71
joerivandervelde
closed
4 years ago
0
Consanguinity information
#70
joerivandervelde
closed
4 years ago
1
Need genotyped sex in addition to biological sex
#69
joerivandervelde
closed
4 years ago
1
Missing information: Research Study details
#68
gurnoor1990
closed
4 years ago
3
HGVS list missing
#67
gurnoor1990
closed
4 years ago
1
FAIRGenomes Codebook: SNOMEDCT, ICD10,HP limited terms
#66
gurnoor1990
closed
3 years ago
3
Added PoC MOLGENIS app.
#65
joerivandervelde
closed
4 years ago
0
Intended insert size
#64
gurnoor1990
closed
4 years ago
0
Intended read length
#63
gurnoor1990
closed
4 years ago
0
Data available in other institutes
#62
gurnoor1990
closed
4 years ago
1
First contact with specialised center
#61
joerivandervelde
closed
4 years ago
0
Primary affiliated institute
#60
gurnoor1990
closed
4 years ago
10
split "Material" and "Technical" into 3
#59
joerivandervelde
closed
4 years ago
2
Missing Information: sequencing provider
#58
gurnoor1990
closed
4 years ago
5
Modelling: Tumor type / event type information missing
#57
gurnoor1990
closed
4 years ago
3
Missing data: Clinical information
#56
gurnoor1990
closed
4 years ago
2
Follows international WGS guidelines
#55
gurnoor1990
closed
4 years ago
1
Special parameters used
#54
gurnoor1990
closed
3 years ago
2
Bioinformatic protocols used
#53
gurnoor1990
closed
4 years ago
2
Algorithms used
#52
gurnoor1990
closed
4 years ago
0
Data formats stored
#51
gurnoor1990
closed
4 years ago
3
Location of data (abstract location)
#50
gurnoor1990
closed
4 years ago
1
Physical data location
#49
gurnoor1990
closed
3 years ago
7
Observed insert size
#48
gurnoor1990
closed
4 years ago
3
Observed read length
#47
gurnoor1990
closed
4 years ago
3
UMIs present yes/no
#46
gurnoor1990
closed
4 years ago
2
Enrichment panel used
#45
gurnoor1990
closed
4 years ago
2
Sequencing average read depth
#44
gurnoor1990
closed
4 years ago
0
PCR-free yes/no
#43
gurnoor1990
closed
4 years ago
1
Type of sequencing
#42
gurnoor1990
closed
4 years ago
5
Sequencing platform
#41
gurnoor1990
closed
4 years ago
3
Sample prep kit
#40
gurnoor1990
closed
4 years ago
5
Sequencing date
#39
gurnoor1990
closed
4 years ago
0
is a deritative or not?
#38
gurnoor1990
closed
4 years ago
3
Physical location
#37
gurnoor1990
closed
4 years ago
2
Amount of input material used
#36
gurnoor1990
closed
4 years ago
5
Estimated percentage of tumor cells
#35
gurnoor1990
closed
4 years ago
2
Expiration date
#34
gurnoor1990
closed
4 years ago
0
Storage conditions
#33
gurnoor1990
closed
4 years ago
6
Anatomical source
#32
gurnoor1990
closed
3 years ago
5
Material type
#31
gurnoor1990
closed
3 years ago
10
Reasons for protocol deviation
#30
gurnoor1990
closed
4 years ago
0
Reasons for protocol deviation
#29
gurnoor1990
closed
4 years ago
0
Deviations from sample protocol
#28
gurnoor1990
closed
4 years ago
0
Sampling collection protocol
#27
gurnoor1990
closed
4 years ago
0
Registration time stamp
#26
gurnoor1990
closed
4 years ago
1
Sampling time stamp
#25
gurnoor1990
closed
4 years ago
1
Age of onset
#24
gurnoor1990
closed
4 years ago
0
Procedural history
#23
gurnoor1990
closed
4 years ago
0
Family members sequenced
#22
gurnoor1990
closed
4 years ago
0
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