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fanglab / SMALR

SMALR: a framework for single-molecule level interrogation of the methylation status of SMRT reads.
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Fixes issue #6. #7

Closed andersgs closed 6 years ago

andersgs commented 6 years ago

Hello.

In line 387 of smalr.py, the sort command was leading to issues. This may be because of changes in how shell=True works in the subprocess.Popen. Anyway, a small edit of that line seems to have fixed to issue for me.

The remaining changed lines are from my text editor automatically removing spaces in empty lines, and trimming lines of spaces before a newline character.

This closes issues #6.

Best.

Anders.

andersgs commented 6 years ago

Added a suggested minor version bump, now that there is a release.

jbeaulaurier commented 6 years ago

Thanks for digging into that issue, Anders! I'll close out issue #6.