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fanglab / nanodisco

nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nanopore sequencing.
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Failure to install #65

Closed Arkadiy-Garber closed 1 year ago

Arkadiy-Garber commented 1 year ago

Hi, I am unable to install the software, please help when you can. Here are my command:

WKS:~$ singularity pull --name nanodisco.sif library://fanglab/default/nanodisco INFO: Using cached image WARNING: integrity: signature not found for object group 1 WARNING: Skipping container verification

WKS:~$ singularity build nd_env nanodisco.sif INFO: Starting build... INFO: Verifying bootstrap image nanodisco.sif WARNING: integrity: signature not found for object group 1 WARNING: Bootstrap image could not be verified, but build will continue. ERROR: unpackSIF failed: root filesystem extraction failed: could not extract squashfs data, unsquashfs not found FATAL: While performing build: packer failed to pack: root filesystem extraction failed: could not extract squashfs data, unsquashfs not found

Thanks!

Arkadiy-Garber commented 1 year ago

All these commands should be preceded by sudo:

sudo singularity pull --name nanodisco.sif library://fanglab/default/nanodisco sudo singularity build nd_env nanodisco.sif