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fanglab
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nanodisco
nanodisco: a toolbox for discovering and exploiting multiple types of DNA methylation from individual bacteria and microbiomes using nanopore sequencing.
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Return no data during current difference
#34
SorenHeidelbach
closed
2 years ago
3
Resource overutilization with nanodisco difference
#33
cjfields
opened
2 years ago
5
Nanodisco difference incomplete chunk analysis
#32
wentski
closed
1 year ago
3
error when running nanodisco motif command
#31
H1889
closed
1 year ago
11
Issue when performing 'nanodisco characterize'
#30
lorenzocasbarra
closed
1 year ago
2
Changes in coverage before and after Nanodisco preprocessing
#29
GeorgiaBreckell
closed
1 year ago
1
Potential issues with Guppy, the sup basecalling model, and barcodes
#28
alexanderwg-ornl
closed
2 years ago
2
Object does not exist in this HDF5 file
#27
alexanderwg-ornl
closed
2 years ago
8
nanodisco motif p value
#26
gluspaula
closed
2 years ago
2
Suitable to compare isogenic methylation profiles?
#25
lthomp06
closed
1 year ago
1
Update to version v1.0.3
#24
touala
closed
2 years ago
0
Problem reading the basecaller information
#23
mtisza1
closed
1 year ago
6
Some questions about methylation detection
#22
yzyupup
closed
1 year ago
3
no WGA data
#21
s4251484
closed
2 years ago
1
"From" values not present in "X" error
#20
GeorgiaBreckell
closed
2 years ago
1
Rapid PCR Barcoding data as methylation free?
#19
mtisza1
opened
3 years ago
4
Computational resources with `nanodisco difference`
#18
mtisza1
closed
3 years ago
3
Guppy compatibility
#17
nathanjohns
closed
2 years ago
3
De novo discovery of methylation motifs for metagenomic samples
#16
BurinkiWU
closed
2 years ago
1
Normalization did not reach convergence
#15
GeorgiaBreckell
closed
2 years ago
1
How to choose the best chunks region for personal metagenome data
#14
BurinkiWU
closed
2 years ago
1
Update to version v1.0.2
#13
touala
closed
3 years ago
0
Unavailable to run personal metadate via Nanodisco
#12
BurinkiWU
closed
2 years ago
6
Merge with current master (v1.0.1)
#11
touala
closed
3 years ago
0
Update to version v1.0.1
#10
touala
closed
3 years ago
0
Column `motif` is unknown
#9
LynnLy
closed
2 years ago
4
List of common methylation motifs is missing
#8
LynnLy
closed
3 years ago
2
nanodisco difference: object 'path_basecalling' not found
#7
mloleary-0
closed
2 years ago
8
reference metagenome file
#6
yfan2012
closed
3 years ago
2
nanodisco difference can't find the proper basecalling version
#5
Nevotii
closed
2 years ago
5
Choosing basecaller version
#4
LynnLy
closed
3 years ago
3
Tmpdir not found with difference
#3
Lcornet
closed
2 years ago
1
Could nanodisco detect methylation from other species
#2
lemonsky123
closed
3 years ago
2
Merge with dev branch
#1
touala
closed
4 years ago
0
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