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farhangus / Sniffles2_plot

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issue plotting multiple vcf files #12

Open caromontano opened 2 months ago

caromontano commented 2 months ago

I have a folder with ~12 vcf files from human genome ONT data that I want to plot, but I get this error: ValueError: Image size of 1358933x7111 pixels is too large. It must be less than 2^16 in each direction. It looks like a matplotlib issue from my searches online, is there a way one can save to pdf instead of jpg?

farhangus commented 2 months ago

Thanks for your message. I haven't added the feature for generating PDF output yet. I'll inform you whenever it is completed

tuannguyen8390 commented 1 month ago

probably related here, I have 277 samples and this will 100% happen to my case. So is it possible to "skip" this plot instead ?