Closed jeremymchacon closed 8 months ago
Hello,
I installed sniffle2_plot with pip into a conda environment. When I try to run it, I get:
python3: can't open file 'src/sniffles2_plot/cli/vcf_visulaizer.py': [Errno 2] No such file or directory
I think the issue is because of hard-coded paths like so:
f"python3 src/sniffles2_plot/cli/vcf_visulaizer.py -i {input_file_path} -o {output_file_path}"
For now I will get around it by calling vcf_visulaizer directly, but wanted to let you know.
Best,
Jeremy
Thanks for letting me know, the issue is already solved and will be updated in the next release
Hello,
I installed sniffle2_plot with pip into a conda environment. When I try to run it, I get:
I think the issue is because of hard-coded paths like so:
For now I will get around it by calling vcf_visulaizer directly, but wanted to let you know.
Best,
Jeremy