farrellja / URD

URD - Reconstruction of Branching Developmental Trajectories
GNU General Public License v3.0
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Plotting a long list of genes on URD cell #19

Closed fereshtehizadi closed 5 years ago

fereshtehizadi commented 5 years ago

Hi,

Seurat R package has some functions like FeaturePlot and DoHeatmap by which we can plot the expression of a list of genes on cell clusters. Likely URD does not have such options or I can not find that. URD has plotDot but would be clear only for a few number of genes. Could you please help me in plotting the expression pattern of a list of genes (for example 200 genes) on cluster of cells in URD?

Thanks a lot in advance