Hi,
@farrellja , my object is too large, so that I can not generate biased transition matrix:
biased.tm <- pseudotimeWeightTransitionMatrix(object, pseudotime = "pseudotime", logistic.params = diffusion.logistic, pseudotime.direction = "<")
The error as following is 'Error: cannot allocate vector of size 10.8 Gb‘
and my input object=1.8G, and the number of my cells is 38000.
What can I do for this?
Hi, @farrellja , my object is too large, so that I can not generate biased transition matrix: biased.tm <- pseudotimeWeightTransitionMatrix(object, pseudotime = "pseudotime", logistic.params = diffusion.logistic, pseudotime.direction = "<") The error as following is 'Error: cannot allocate vector of size 10.8 Gb‘ and my input object=1.8G, and the number of my cells is 38000. What can I do for this?